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  5. Ehy_g30224

Ehy_g30224


Description : ribonuclease *(RNC1) & original description: none


Gene families : OG0004387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g30224

Target Alias Description ECC score Gene Family Method Actions
AT4G37510 No alias Ribonuclease III family protein 0.08 OrthoFinder output from all 47 species
Adi_g051860 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36445 No alias ribonuclease *(RNC1) & original description: none 0.08 OrthoFinder output from all 47 species
Als_g12300 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08305 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000334 No alias ribonuclease *(RNC1) & original description: CDS=41-2044 0.04 OrthoFinder output from all 47 species
Cba_g08197 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G005400.1 Ceric.37G005400 ribonuclease *(RNC1) & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01000148001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
LOC_Os01g59510.1 LOC_Os01g59510 ribonuclease (RNC1) 0.03 OrthoFinder output from all 47 species
Len_g38817 No alias ribonuclease *(RNC1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11243 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436489g0010 No alias ribonuclease (RNC1) 0.03 OrthoFinder output from all 47 species
Mp1g04540.1 No alias ribonuclease (RNC1) 0.04 OrthoFinder output from all 47 species
Nbi_g17999 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18587 No alias ribonuclease *(RNC1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17066 No alias ribonuclease *(RNC1) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005842 No alias ribonuclease *(RNC1) & original description: CDS=1-1689 0.05 OrthoFinder output from all 47 species
Sam_g14760 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Smo145591 No alias RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Solyc10g080040.3.1 Solyc10g080040 ribonuclease (RNC1) 0.03 OrthoFinder output from all 47 species
Spa_g22190 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11601 No alias ribonuclease *(RNC1) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019511_P001 Zm00001e019511 ribonuclease (RNC1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!