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  5. Ehy_g23264

Ehy_g23264


Description : assembly factor involved in RuBisCo assembly *(RAF1) & original description: none


Gene families : OG0006523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g23264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00163120 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.07 OrthoFinder output from all 47 species
AT3G04550 No alias unknown protein; INVOLVED IN: biological_process... 0.03 OrthoFinder output from all 47 species
Adi_g075453 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.03 OrthoFinder output from all 47 species
Aev_g05322 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.07 OrthoFinder output from all 47 species
Ala_g02002 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.05 OrthoFinder output from all 47 species
Aob_g17485 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33663.t1 Aspi01Gene33663 assembly factor involved in RuBisCo assembly *(RAF1) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008439 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.04 OrthoFinder output from all 47 species
Dac_g13000 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.03 OrthoFinder output from all 47 species
Dcu_g12984 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.05 OrthoFinder output from all 47 species
Dde_g00790 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.05 OrthoFinder output from all 47 species
MA_184421g0020 No alias RAF1 assembly factor involved in RuBisCo assembly 0.06 OrthoFinder output from all 47 species
Mp1g20960.1 No alias RAF1 assembly factor involved in RuBisCo assembly 0.02 OrthoFinder output from all 47 species
Msp_g10495 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.03 OrthoFinder output from all 47 species
Nbi_g09141 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.05 OrthoFinder output from all 47 species
Ore_g05484 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.07 OrthoFinder output from all 47 species
Ore_g05485 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.03 OrthoFinder output from all 47 species
Pp3c18_4320V3.1 Pp3c18_4320 No annotation 0.03 OrthoFinder output from all 47 species
Spa_g04323 No alias assembly factor involved in RuBisCo assembly *(RAF1) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR040781 Raf1_HTH 131 188
IPR041358 Raf1_N 201 302
No external refs found!