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  5. Ehy_g23182

Ehy_g23182


Description : not classified & original description: none


Gene families : OG0005965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005965_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g23182
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Aev_g17360 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10060 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67734 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05196 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17737 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56148 No alias alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g16880 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43361 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36048 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61538 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019976 No alias alpha-class expansin & original description: CDS=1-762 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019979 No alias alpha-class expansin & original description: CDS=1-759 0.04 OrthoFinder output from all 47 species
Spa_g07260 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51230 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004712_P001 Zm00001e004712 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP HCCA
MF GO:0004000 adenosine deaminase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006382 adenosine to inosine editing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016553 base conversion or substitution editing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!