Aliases : SRS1, STY1
Description : SRS-type transcription factor & original description: none
Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ehy_g21838 | |
Cluster | HCCA: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00223800 | SHI,... | RNA biosynthesis.transcriptional activation.SRS... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00063p00161200 | LRP1,... | RNA biosynthesis.transcriptional activation.SRS... | 0.02 | OrthoFinder output from all 47 species | |
AT1G75520 | SRS5 | SHI-related sequence 5 | 0.03 | OrthoFinder output from all 47 species | |
AT5G33210 | SRS8 | SHI-related sequence 8 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g061023 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g077130 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g079607 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g085909 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene65745.t1 | SHI, Aspi01Gene65745 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0062.g035174 | SHI | SRS-type transcription factor & original description: CDS=1-1092 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0065.g035783 | SHI | SRS-type transcription factor & original description: CDS=1-2148 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0092.g043005 | SRS5 | SRS-type transcription factor & original description: CDS=39-1118 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0385.g067525 | SHI | SRS-type transcription factor & original description: CDS=1-693 | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g40676 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g47477 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g06073 | SHI | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01009812001 | SRS5 | RNA biosynthesis.transcriptional activation.SRS... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01024206001 | SHI | RNA biosynthesis.transcriptional activation.SRS... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01037267001 | No alias | RNA biosynthesis.transcriptional activation.SRS... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g49830.1 | SRS1, STY1,... | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
MA_2299g0010 | LRP1 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Mp3g19510.1 | SHI | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g59296 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0051.g013968 | SHI | SRS-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g084680.3.1 | SRS1, STY1,... | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g054070.1.1 | SRS5, Solyc10g054070 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g50442 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004006_P001 | SHI, Zm00001e004006 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e010227_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013256_P002 | SHI, Zm00001e013256 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026854_P001 | SHI, Zm00001e026854 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028304_P001 | LRP1, Zm00001e028304 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e030189_P001 | SHI, Zm00001e030189 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e034798_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |