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  5. Ehy_g19643

Ehy_g19643


Description : microtubule assembly factor *(TCS1) & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g19643
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00035p00234670 evm_27.TU.AmTr_v1... Filament-like plant protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g49569 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.27G007900.1 Ceric.27G007900 microtubule assembly factor *(TCS1) & original... 0.05 OrthoFinder output from all 47 species
Gb_25170 No alias Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g08365 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g02317 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 71 625
IPR008587 FPP_plant 628 869
No external refs found!