Aliases : TMO6
Description : transcription factor *(DOF) & original description: none
Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Adi_g106333 | |
Cluster | HCCA: Cluster_253 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00248860 | TMO6,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0166.g054389 | TMO6 | transcription factor *(DOF) & original description: CDS=1-1341 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g29247 | No alias | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.22G023400.1 | OBP3, Ceric.22G023400 | transcription factor *(DOF) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g05583 | TMO6 | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g18747 | No alias | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g26839 | CDF1 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g27889 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01007758001 | HCA2, DOF5.6 | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g05846 | TMO6 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g26476 | TMO6 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g16493 | CDF3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g32547 | CDF3 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0156.g023637 | CDF3 | transcription factor *(DOF) & original description: CDS=1-1434 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0279.g027089 | ADOF1, DOF1 | transcription factor *(DOF) & original description: CDS=1-1056 | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038479_P002 | OBP3, Zm00001e038479 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 49 | 105 |
No external refs found! |