1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g105498

Adi_g105498


Description : not classified & original description: none


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g105498

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G33680 No alias KH domain-containing protein 0.03 OrthoFinder output from all 47 species
AT5G50940 No alias RNA-binding KH domain-containing protein 0.01 OrthoFinder output from all 47 species
Adi_g088533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32757 No alias virus infection resistance factor *(BTR1) & original... 0.04 OrthoFinder output from all 47 species
Aob_g08444 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g11832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72682 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G027700.1 Ceric.03G027700 not classified & original description: pacid=50573278... 0.04 OrthoFinder output from all 47 species
Ceric.20G036400.1 Ceric.20G036400 not classified & original description: pacid=50567078... 0.03 OrthoFinder output from all 47 species
Dac_g09113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035354001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01036378001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_04922 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os08g01930.1 LOC_Os08g01930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g24459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g59778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434164g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_13061g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g07780.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g42189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17404 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g26146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000424 No alias not classified & original description: CDS=117-1961 0.04 OrthoFinder output from all 47 species
Solyc11g040370.2.1 Solyc11g040370 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g07319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014452_P001 Zm00001e014452 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024927_P001 Zm00001e024927 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e029163_P001 Zm00001e029163 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP HCCA
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 331 397
IPR004088 KH_dom_type_1 238 304
No external refs found!