Ehy_g17378


Description : component *(SMG8) of SMG1C protein kinase complex & original description: none


Gene families : OG0006988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g17378

Target Alias Description ECC score Gene Family Method Actions
Dac_g16675 No alias component *(SMG8) of SMG1C protein kinase complex &... 0.02 OrthoFinder output from all 47 species
Dde_g26418 No alias component *(SMG8) of SMG1C protein kinase complex &... 0.03 OrthoFinder output from all 47 species
MA_10431872g0010 No alias component SMG8 of SMG1C protein kinase complex 0.03 OrthoFinder output from all 47 species
Tin_g44354 No alias component *(SMG8) of SMG1C protein kinase complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
InterPro domains Description Start Stop
IPR019354 SMG8/SMG9 1004 1108
IPR019354 SMG8/SMG9 657 829
IPR019354 SMG8/SMG9 119 297
No external refs found!