Adi_g088524 (IMPA-4)

Aliases : IMPA-4

Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) & original description: none

Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g088524

Target	Alias	Description	ECC score	Gene Family Method
Adi_g056735	IMPA-3, MOS6, ATIMPALPHA3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g09820	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Ceric.17G010100.1	IMPA-3, MOS6,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Ceric.34G036300.1	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021721.27	IMPA-2	Protein translocation.nucleus.nucleocytoplasmic...	0.01	OrthoFinder output from all 47 species
Pir_g01366	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.02	OrthoFinder output from all 47 species
Solyc08g041890.4.1	IMPA-1, IMPA1,...	importin alpha adaptor proteins	0.02	OrthoFinder output from all 47 species
Spa_g06726	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Spa_g40581	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.02	OrthoFinder output from all 47 species
Spa_g41578	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
BP	GO:0006606	protein import into nucleus	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0061608	nuclear import signal receptor activity	IEA	Interproscan
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004019	adenylosuccinate synthase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	191	229
IPR000225	Armadillo	403	441
IPR000225	Armadillo	276	313
IPR000225	Armadillo	242	272
IPR000225	Armadillo	360	399
IPR000225	Armadillo	106	146
IPR000225	Armadillo	317	358
IPR000225	Armadillo	149	188
IPR002652	Importin-a_IBB	12	95
IPR032413	Arm_3	458	508

External Links

No external refs found!

Adi_g088524 (IMPA-4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation