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  5. Adi_g087396

Adi_g087396 (AT-GTL1, GTL1, AT-GTL2)


Aliases : AT-GTL1, GTL1, AT-GTL2

Description : not classified & original description: none


Gene families : OG0000670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000670_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g087396

Target Alias Description ECC score Gene Family Method Actions
Ala_g02151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16838 emb2746 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14523 AT-GT2, GT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28410.t1 AT-GT2, GT2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G045400.1 Ceric.27G045400 not classified & original description: pacid=50605477... 0.02 OrthoFinder output from all 47 species
Dac_g26969 AT-GT2, GT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09968 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g05537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16747 AT-GT2, GT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004805 No alias not classified & original description: CDS=1-1359 0.02 OrthoFinder output from all 47 species
Sam_g36070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11472 AT-GT2, GT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 496 578
IPR044822 Myb_DNA-bind_4 91 171
No external refs found!