Adi_g084677 (TGA2, AHBP-1B)


Aliases : TGA2, AHBP-1B

Description : TGA-type transcription factor & original description: none


Gene families : OG0000342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g084677

Target Alias Description ECC score Gene Family Method Actions
Aob_g26058 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Cba_g03904 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018729 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Solyc10g080770.3.1 TGA2, AHBP-1B,... transcription factor (bZIP). transcription factor (TGA).... 0.02 OrthoFinder output from all 47 species
Spa_g51850 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004827 bZIP 171 207
IPR025422 TGA_domain 253 322
No external refs found!