1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g083426

Adi_g083426 (Hop1)


Aliases : Hop1

Description : Hsp90/Hsp70-co-chaperone *(HOP) & original description: none


Gene families : OG0001366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001366_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g083426

Target Alias Description ECC score Gene Family Method Actions
AT1G12270 Hop1 stress-inducible protein, putative 0.02 OrthoFinder output from all 47 species
Dcu_g15159 Hop3 Hsp90/Hsp70-co-chaperone *(HOP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431292g0020 Hop3 Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_8200529g0010 Hop2 Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g079170.3.1 Hop2, Solyc08g079170 Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041243 STI1/HOP_DP 137 190
IPR001440 TPR_1 70 103
IPR019734 TPR_repeat 289 313
IPR013105 TPR_2 7 35
No external refs found!