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Aliases : PDF2
Description : HD-ZIP IV-type transcription factor & original description: none
Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00048p00089530 | HDG5, HB-7,... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g23646 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g25555 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05720 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06562 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G081600.1 | ATML1, Ceric.18G081600 | HD-ZIP IV-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z007700.1 | HDG12, Ceric.1Z007700 | not classified & original description: pacid=50637294... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G064400.1 | ATML1, Ceric.29G064400 | HD-ZIP IV-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g11376 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g13002 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g15268 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g16909 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g20385 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01029396001 | EDT1, HDG11, ATHDG11 | RNA biosynthesis.transcriptional activation.HB... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g08820.2 | PDF2, LOC_Os08g08820 | transcription factor (HD-ZIP IV) | 0.04 | OrthoFinder output from all 47 species | |
| MA_103885g0010 | ATML1 | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10433688g0010 | ATML1 | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
| MA_16767g0010 | PDF2 | transcription factor (HD-ZIP IV) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g25796 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g13845 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g23330 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18283 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g19174 | EDT1, HDG11, ATHDG11 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g46298 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g50253 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g51145 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13777 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002453_P001 | HDG5, HB-7,... | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039947_P001 | HDG2, Zm00001e039947 | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e042218_P002 | HDG2, Zm00001e042218 | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008289 | lipid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003993 | acid phosphatase activity | IEP | HCCA |
| MF | GO:0004615 | phosphomannomutase activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | HCCA |
| BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | HCCA |
| BP | GO:0009298 | GDP-mannose biosynthetic process | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019673 | GDP-mannose metabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| No external refs found! |