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  5. Adi_g077989

Adi_g077989 (UPL3, KAK)


Aliases : UPL3, KAK

Description : E3 ubiquitin ligase *(UPL3) & original description: none


Gene families : OG0001729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g077989

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00119160 UPL3, KAK,... Protein degradation.peptide tagging.Ubiquitin... 0.08 OrthoFinder output from all 47 species
AT4G38600 UPL3, KAK HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.12 OrthoFinder output from all 47 species
Aev_g49450 UPL3, KAK LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02725 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g14715 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20762 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g08791 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene47697.t2 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008108 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: CDS=419-6391 0.08 OrthoFinder output from all 47 species
Azfi_s0008.g011365 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: CDS=427-5601 0.03 OrthoFinder output from all 47 species
Cba_g14867 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G061600.1 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.02G085400.1 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description:... 0.06 OrthoFinder output from all 47 species
Cre07.g312900 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dac_g03421 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20263 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21337 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05114 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08697 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09278 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018731001 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.09 OrthoFinder output from all 47 species
GSVIVT01024033001 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
GSVIVT01025537001 UPL4 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_07121 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Gb_07122 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Gb_20276 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.09 OrthoFinder output from all 47 species
Gb_20277 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.1 OrthoFinder output from all 47 species
Gb_20278 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Gb_21912 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.01 OrthoFinder output from all 47 species
LOC_Os02g01170.1 UPL3, KAK, LOC_Os02g01170 monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Len_g18323 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19132 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g02474 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10426439g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.07 OrthoFinder output from all 47 species
MA_10428377g0020 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
MA_10434379g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.12 OrthoFinder output from all 47 species
MA_140610g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
MA_62286g0020 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
MA_884104g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.09 OrthoFinder output from all 47 species
Mp1g24750.1 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Msp_g00722 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13943 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25162 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25807 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12252 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17671 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009013 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: CDS=326-6067 0.03 OrthoFinder output from all 47 species
Sam_g29297 No alias E3 ubiquitin ligase *(UPL3) & original description: none 0.12 OrthoFinder output from all 47 species
Smo146155 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Solyc01g111530.3.1 UPL3, KAK, Solyc01g111530 monomeric E3 ubiquitin ligase (HECT) 0.11 OrthoFinder output from all 47 species
Solyc10g055450.2.1 UPL3, KAK, Solyc10g055450 monomeric E3 ubiquitin ligase (HECT) 0.08 OrthoFinder output from all 47 species
Spa_g06979 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g17541 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55031 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008508_P001 UPL3, KAK, Zm00001e008508 monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Zm00001e013385_P003 UPL3, KAK, Zm00001e013385 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Zm00001e025424_P001 UPL3, KAK, Zm00001e025424 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 1048 1367
No external refs found!