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  5. Adi_g077047

Adi_g077047 (RPT3)


Aliases : RPT3

Description : regulatory component *(RPT3) of 26S proteasome & original description: none


Gene families : OG0002973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002973_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g077047

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.46 RPT3 26S proteasome regulatory subunit 6B homolog... 0.03 OrthoFinder output from all 47 species
GSVIVT01024544001 RPT3 Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Nbi_g12291 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ore_g18564 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pnu_g12682 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Sam_g35578 No alias regulatory component *(RPT3) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Solyc06g082660.4.1 RPT3, Solyc06g082660 regulatory component RPT3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Zm00001e014107_P001 RPT3, Zm00001e014107 regulatory component RPT3 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 349 382
IPR032501 Prot_ATP_ID_OB_C 80 135
IPR003959 ATPase_AAA_core 193 326
No external refs found!