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  5. Adi_g076988

Adi_g076988


Description : not classified & original description: none


Gene families : OG0001992 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001992_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g076988

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00190140 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
Adi_g109854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0487.g073451 No alias not classified & original description: CDS=405-3596 0.02 OrthoFinder output from all 47 species
Cba_g15675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G076500.1 Ceric.21G076500 not classified & original description: pacid=50604105... 0.05 OrthoFinder output from all 47 species
Ceric.21G076600.1 Ceric.21G076600 not classified & original description: pacid=50603568... 0.04 OrthoFinder output from all 47 species
Dac_g09710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07047 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017976001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031382001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_30397 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_40983 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g09762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g06220.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g06803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g076040.3.1 Solyc09g076040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g066990.2.1 Solyc11g066990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0031047 RNA-mediated gene silencing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005380 XS_domain 842 963
No external refs found!