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  5. Ehy_g15259

Ehy_g15259


Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g15259
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT1G01780 No alias GATA type zinc finger transcription factor family protein 0.03 OrthoFinder output from all 47 species
Cba_g04896 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06316 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27988 WLIM1 LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05819 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01697 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g071310.4.1 WLIM1, Solyc06g071310 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Zm00001e018310_P001 WLIM1, Zm00001e018310 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003876 AMP deaminase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0032261 purine nucleotide salvage IEP HCCA
BP GO:0032264 IMP salvage IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0047623 adenosine-phosphate deaminase activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0106380 purine ribonucleotide salvage IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 10 65
IPR001781 Znf_LIM 109 164
No external refs found!