1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g14594

Ehy_g14594 (ESP3, EMB2733)


Aliases : ESP3, EMB2733

Description : RNA helicase *(Prp2) & original description: none


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g14594

Target Alias Description ECC score Gene Family Method Actions
Adi_g008210 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07016 No alias RNA helicase *(Prp22) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11608 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15706 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0580.g078305 No alias not classified & original description: CDS=60-3857 0.03 OrthoFinder output from all 47 species
Cba_g73283 MEE29 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000796.23 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.2 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.01 OrthoFinder output from all 47 species
Dde_g48013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g20554.1 LOC_Os11g20554 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder output from all 47 species
Msp_g13247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32552 EMB3011 RNA helicase *(Prp16) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03086 No alias RNA helicase *(Prp22) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44212 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.02 OrthoFinder output from all 47 species
Solyc09g008120.4.1 Solyc09g008120 RNA helicase (Prp22) 0.02 OrthoFinder output from all 47 species
Solyc09g097820.3.1 Solyc09g097820 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder output from all 47 species
Solyc12g017700.2.1 ESP3, EMB2733,... RNA helicase (Prp2) 0.02 OrthoFinder output from all 47 species
Zm00001e016478_P002 Zm00001e016478 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 810 884
IPR001650 Helicase_C 617 747
IPR011709 DEAD-box_helicase_OB_fold 958 1035
No external refs found!