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  5. Adi_g060844

Adi_g060844


Description : component *(eS1) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g060844

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00026p00042160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Adi_g060843 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g05100 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.39 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g18202 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os02g18550.1 LOC_Os02g18550 component RPS3a of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp6g02810.1 No alias component RPS3a of SSU proteome 0.02 OrthoFinder output from all 47 species
Sam_g06811 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g07669 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Smo271906 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Solyc03g097900.3.1 Solyc03g097900 component RPS3a of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 16 221
No external refs found!