Aliases : ATPGP4, PGP4, ABCB4, MDR4
Description : not classified & original description: none
Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ehy_g13700 | |
Cluster | HCCA: Cluster_36 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aop_g18063 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene62054.t1 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cre17.g725150 | ATPGP4, PGP4, ABCB4, MDR4 | ABC transporter B family member 7 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Gb_08614 | PGP11 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Gb_10216 | No alias | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Gb_23626 | No alias | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g25374 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10436810g0020 | No alias | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
MA_1824g0020 | No alias | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
MA_937278g0010 | PGP17 | ABC transporter B family member 17 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g009280.1.1 | PGP11, Solyc06g009280 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g067300.2.1 | PGP11, Solyc11g067300 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
Spa_g09413 | PGP2 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
MF | GO:0140359 | ABC-type transporter activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011527 | ABC1_TM_dom | 85 | 154 |
No external refs found! |