Heatmap: Cluster_36 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Internodes of Aerial Stem	Leaf Sheath at Stem Node	Root
Ehy_g00112	-0.08	0.91	-2.58
Ehy_g00418	0.24	0.48	-1.25
Ehy_g00455	0.46	0.68	-5.38
Ehy_g00518 (NF-YB3)	0.14	0.32	-0.62
Ehy_g00764 (ICME-LIKE2)	0.07	0.53	-0.98
Ehy_g00872	0.05	0.92	-3.8
Ehy_g00878	0.19	0.2	-0.49
Ehy_g00964	0.03	0.68	-1.43
Ehy_g00978 (HCT)	0.64	0.49	-4.76
Ehy_g01316	0.08	0.39	-0.67
Ehy_g01436	0.26	0.46	-1.22
Ehy_g01463	0.19	0.81	-3.16
Ehy_g01584 (VTC2)	-0.21	0.87	-1.69
Ehy_g01589	0.18	0.67	-1.85
Ehy_g01690 (LOP1)	0.31	0.67	-2.58
Ehy_g01729	0.33	0.65	-2.56
Ehy_g01903	-0.03	0.73	-1.45
Ehy_g02347	0.38	0.68	-3.48
Ehy_g02396 (PHT3;3)	-0.16	1.01	-3.48
Ehy_g02458	-0.03	0.81	-1.89
Ehy_g02488	0.12	0.89	-4.12
Ehy_g02685	-0.19	0.73	-1.12
Ehy_g02906	0.27	0.59	-1.77
Ehy_g03078	0.19	0.2	-0.5
Ehy_g03104	0.38	0.37	-1.28
Ehy_g03180 (ELIP)	-0.09	1.04	-8.7
Ehy_g03196	-0.49	1.19	-9.67
Ehy_g03308	0.13	0.74	-2.13
Ehy_g03360 (CA4)	0.07	0.93	-4.66
Ehy_g03400	0.33	0.41	-1.28
Ehy_g03401	0.59	0.41	-2.53
Ehy_g03545 (COL3)	0.26	0.85	-8.52
Ehy_g03604 (UGT85A2)	0.15	0.88	-4.22
Ehy_g03707	-0.39	1.16	-8.52
Ehy_g03932 (ATSAC1)	0.16	0.91	-8.89
Ehy_g04049	0.07	0.49	-0.88
Ehy_g04092	0.02	0.9	-3.01
Ehy_g04484 (ELI3)	0.13	0.89	-4.24
Ehy_g04508	0.11	0.94	-7.36
Ehy_g04748	0.24	0.64	-1.94
Ehy_g04871	0.16	0.8	-2.74
Ehy_g04932 (KCS4)	0.25	0.25	-0.68
Ehy_g04977 (PDF2)	0.22	0.83	-4.13
Ehy_g05220 (FMA)	-0.41	1.17	-
Ehy_g05255	-0.13	0.99	-3.37
Ehy_g05336	-0.02	0.94	-3.5
Ehy_g05574	-0.32	1.12	-5.35
Ehy_g05841	-0.06	0.89	-2.44
Ehy_g05842 (UVR3)	0.44	0.64	-3.56
Ehy_g05871 (SPS1)	0.18	0.6	-1.49
Ehy_g05906 (SIGB)	0.18	0.82	-3.32
Ehy_g05938	0.28	0.32	-0.89
Ehy_g06336	0.16	0.88	-4.69
Ehy_g06484 (ILR3)	0.22	0.22	-0.58
Ehy_g06611	-0.1	0.89	-2.24
Ehy_g06712	0.21	0.68	-2.1
Ehy_g06752	0.05	0.79	-2.05
Ehy_g06810 (LYC)	0.04	0.65	-1.32
Ehy_g06982	-0.06	0.72	-1.33
Ehy_g07097	-0.09	1.04	-7.43
Ehy_g07219	0.57	0.6	-
Ehy_g07244	-0.2	1.08	-6.84
Ehy_g07282	0.02	0.59	-1.06
Ehy_g07649 (ASP1)	0.34	0.48	-1.55
Ehy_g07676 (HCT)	0.36	0.31	-1.07
Ehy_g08135	0.16	0.88	-4.37
Ehy_g08243 (SOUL-1)	0.46	0.67	-4.98
Ehy_g08267 (GME)	0.07	0.87	-3.08
Ehy_g08272 (FIB)	-0.36	1.03	-2.5
Ehy_g08316	-0.03	0.54	-0.82
Ehy_g08344	0.13	0.73	-2.05
Ehy_g08373	-0.04	0.53	-0.77
Ehy_g08709	0.17	0.55	-1.27
Ehy_g08801	0.29	0.57	-1.78
Ehy_g08884	0.28	0.48	-1.35
Ehy_g08889 (UBC10)	0.03	0.18	-0.24
Ehy_g08897	-0.18	0.85	-1.69
Ehy_g09147	0.11	0.42	-0.76
Ehy_g09549 (GSTU20)	-0.01	0.81	-1.97
Ehy_g09554	0.43	0.58	-2.6
Ehy_g09629	-0.18	1.03	-3.73
Ehy_g09775	0.39	0.72	-4.52
Ehy_g09853 (FAAH)	0.17	0.72	-2.15
Ehy_g09879	0.17	0.33	-0.69
Ehy_g09899 (PAO)	0.18	0.8	-3.05
Ehy_g10395 (ZIFL1)	0.09	0.8	-2.39
Ehy_g10396	0.04	0.57	-1.04
Ehy_g10443	0.07	0.91	-3.73
Ehy_g10606 (HB5)	0.33	0.65	-2.51
Ehy_g10900	0.04	0.76	-1.82
Ehy_g11168	0.36	0.64	-2.66
Ehy_g11231 (LEJ1)	0.16	0.78	-2.6
Ehy_g11422	0.49	0.65	-5.72
Ehy_g11999 (BDG1)	0.46	0.7	-
Ehy_g12205	0.19	0.46	-1.04
Ehy_g12262 (GSTU20)	0.17	0.7	-2.03
Ehy_g12322	0.24	0.86	-
Ehy_g12687	0.12	0.94	-
Ehy_g12688	0.14	0.92	-
Ehy_g13062	0.22	0.65	-1.92
Ehy_g13250	0.02	0.94	-3.76
Ehy_g13626 (KT1)	0.13	0.93	-
Ehy_g13700 (PGP4)	-0.11	1.02	-4.31
Ehy_g13815 (UGT85A1)	0.28	0.73	-2.99
Ehy_g13950	0.42	0.36	-1.39
Ehy_g14132	0.48	0.59	-3.24
Ehy_g14133 (FUS1)	0.47	0.63	-3.87
Ehy_g14148 (NADP-ME2)	0.06	0.89	-3.32
Ehy_g14524	0.44	0.49	-2.07
Ehy_g14954 (RUP2)	0.19	0.9	-
Ehy_g15322	0.12	0.94	-
Ehy_g15593 (LHCA3)	0.08	0.9	-3.74
Ehy_g15630	0.37	0.51	-1.85
Ehy_g15780	-0.13	1.06	-
Ehy_g16170	0.04	0.73	-1.67
Ehy_g16222	0.06	0.46	-0.78
Ehy_g16293 (ELIP)	-0.47	1.18	-6.86
Ehy_g16454 (CYP709B2)	0.04	0.49	-0.81
Ehy_g16907 (UVR2)	0.24	0.79	-3.41
Ehy_g17194 (EMB2219)	0.21	0.48	-1.14
Ehy_g17397	-0.11	0.84	-1.85
Ehy_g17461	0.38	0.61	-2.51
Ehy_g17503	0.21	0.65	-1.88
Ehy_g17549	0.37	0.39	-1.34
Ehy_g17641 (LTA1)	0.16	0.31	-0.64
Ehy_g17697	0.12	0.74	-2.08
Ehy_g17945	-0.45	1.12	-3.48
Ehy_g18277	0.0	0.93	-3.41
Ehy_g18296	0.15	0.81	-2.84
Ehy_g18628	-0.14	0.88	-1.95
Ehy_g18706	0.07	0.68	-1.52
Ehy_g18710	-0.0	0.74	-1.61
Ehy_g18738 (CAD6)	0.07	0.83	-2.6
Ehy_g18774 (ERD13)	0.15	0.91	-5.77
Ehy_g18855	0.15	0.51	-1.11
Ehy_g18918 (FMA)	-0.73	1.26	-
Ehy_g19172	-0.79	1.27	-
Ehy_g19248	0.11	0.94	-7.27
Ehy_g19367	0.38	0.49	-1.75
Ehy_g19381	0.45	0.63	-3.61
Ehy_g19391	0.08	0.21	-0.34
Ehy_g19570	0.0	0.99	-5.79
Ehy_g19623	0.14	0.59	-1.32
Ehy_g19735 (BRS1)	0.23	0.73	-2.63
Ehy_g19881	0.19	0.29	-0.64
Ehy_g19939 (PPDK)	0.33	0.62	-2.23
Ehy_g20068	-0.1	1.05	-
Ehy_g20070	-0.97	1.32	-
Ehy_g20085	0.13	0.93	-
Ehy_g20106	0.43	0.68	-4.36
Ehy_g20172	0.02	0.93	-3.77
Ehy_g20212	-0.13	0.9	-2.17
Ehy_g20431	0.13	0.58	-1.28
Ehy_g20475	-0.46	1.15	-4.13
Ehy_g20500	0.07	0.48	-0.87
Ehy_g20558	0.07	0.71	-1.67
Ehy_g20724	0.07	0.87	-3.13
Ehy_g20777 (GLR3.3)	0.52	0.6	-4.24
Ehy_g21739	0.29	0.7	-2.7
Ehy_g21898	-0.15	0.75	-1.28
Ehy_g21973	0.04	0.45	-0.73
Ehy_g22103 (BAS1)	0.16	0.55	-1.27
Ehy_g22502 (Z-ISO)	0.14	0.49	-1.04
Ehy_g22555 (UBC1)	0.24	0.22	-0.62
Ehy_g22760	0.18	0.43	-0.92
Ehy_g22768	-0.45	1.18	-
Ehy_g23023	-0.41	1.07	-2.73
Ehy_g23086	0.2	0.6	-1.57
Ehy_g23188 (TT7)	0.28	0.46	-1.29
Ehy_g23529 (B1)	-0.35	1.12	-4.62
Ehy_g23721	-0.11	0.74	-1.33
Ehy_g24538 (UGT85A7)	0.41	0.73	-6.1
Ehy_g24894	0.29	0.79	-4.56
Ehy_g24896 (BGLU40)	-0.47	1.16	-4.86
Ehy_g25158 (GSTU20)	0.14	0.51	-1.08
Ehy_g25225 (TT7)	0.07	0.59	-1.18
Ehy_g25454	0.11	0.88	-3.59
Ehy_g25744 (CCD4)	0.17	0.9	-7.45
Ehy_g25747	-0.29	1.12	-6.09
Ehy_g26013	-0.23	0.87	-1.66
Ehy_g26144	-0.01	0.76	-1.7
Ehy_g26166	-0.28	1.0	-2.5
Ehy_g27689	0.19	0.66	-1.85
Ehy_g28364 (CSD1)	0.17	0.47	-1.03
Ehy_g28546	-0.12	0.94	-2.59
Ehy_g29085 (FAD7)	-0.1	0.92	-2.57
Ehy_g29555 (MOT1)	0.1	0.64	-1.45
Ehy_g30284	-0.07	0.79	-1.62
Ehy_g30561 (BGLU40)	0.33	0.48	-1.51
Ehy_g31015 (JAZ4)	0.3	0.52	-1.58
Ehy_g31270 (CYP72A15)	0.13	0.78	-2.39
Ehy_g31523	0.03	0.57	-1.02
Ehy_g31711	0.4	0.55	-2.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.