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  5. Adi_g058433

Adi_g058433


Description : RNA polymerase nuclear import factor *(RIMA) & original description: none


Gene families : OG0005503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g058433

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00194360 evm_27.TU.AmTr_v1... RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 OrthoFinder output from all 47 species
Cre12.g532700 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os05g04370.1 LOC_Os05g04370 RIMA RNA polymerase nuclear import factor 0.03 OrthoFinder output from all 47 species
MA_10427159g0010 No alias RIMA RNA polymerase nuclear import factor 0.03 OrthoFinder output from all 47 species
Ore_g30429 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.02 OrthoFinder output from all 47 species
Sam_g11863 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.02 OrthoFinder output from all 47 species
Tin_g04125 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007308 Rtr1/RPAP2_dom 35 108
No external refs found!