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  5. Ehy_g13492

Ehy_g13492 (SPL12)


Aliases : SPL12

Description : SBP-type transcription factor & original description: none


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g13492
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00076020 SPL1,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Als_g07275 SPL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g29191 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31923 SPL1R2, ATSPL14,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_37539 SPL1R2, ATSPL14,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Tin_g13735 SPL12 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 117 190
No external refs found!