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  5. Adi_g056339

Adi_g056339


Description : putative silicon efflux transporter *(LSI2) & original description: none


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g056339
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00064780 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00168p00065430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder output from all 47 species
Aev_g16129 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Als_g37588 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aob_g26379 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32932.t1 Aspi01Gene32932 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Cba_g38733 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G016900.1 Ceric.13G016900 putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g41359 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11019 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01019733001 No alias Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder output from all 47 species
LOC_Os02g57620.1 LOC_Os02g57620 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
LOC_Os03g01700.1 LOC_Os03g01700 putative silicon efflux transporter (LSI2) 0.06 OrthoFinder output from all 47 species
LOC_Os10g39980.1 LOC_Os10g39980 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Len_g36354 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g10667 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Mp1g14840.1 No alias putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species
Ppi_g13706 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006251 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018482 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018485 No alias not classified & original description: CDS=1-372 0.02 OrthoFinder output from all 47 species
Sam_g06643 No alias putative silicon efflux transporter *(LSI2) & original... 0.01 OrthoFinder output from all 47 species
Smo148775 No alias Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder output from all 47 species
Solyc06g036100.3.1 Solyc06g036100 putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species
Spa_g26114 No alias putative silicon efflux transporter *(LSI2) & original... 0.01 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
Zm00001e002282_P001 Zm00001e002282 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 12 132
No external refs found!