Solyc12g044410.2.1 (Solyc12g044410.2)


Aliases : Solyc12g044410.2

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family Member of the class III HD-ZIP protein family.


Gene families : OG_01_0000594 (Gene family) Phylogenetic Tree(s): OG0000594_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g044410.2.1
Cluster HCCA cluster: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016272001 No alias 33.99 development.unspecified REVOLUTA regulates... 0.04 Gene family
GSVIVT01017010001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
GSVIVT01035612001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os03g01890 Os03g0109400 33.99 development.unspecified REVOLUTA regulates... 0.05 Gene family
Zm00001d013699 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Zm00001d031061 GRMZM2G003509 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d033246 GRMZM2G023291,... 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 160 367
IPR001356 Homeobox_dom 16 74
IPR013978 MEKHLA 694 836
No external refs found!