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  5. Adi_g050814

Adi_g050814 (CP24, LHCB6)


Aliases : CP24, LHCB6

Description : component *(LHCb6) of LHC-II complex & original description: none


Gene families : OG0003880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g050814
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268360 CP24, LHCB6,... Photosynthesis.photophosphorylation.photosystem... 0.16 OrthoFinder output from all 47 species
AT1G15820 CP24, LHCB6 light harvesting complex photosystem II subunit 6 0.19 OrthoFinder output from all 47 species
Aev_g42764 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g46568 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.13 OrthoFinder output from all 47 species
Ala_g04130 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.17 OrthoFinder output from all 47 species
Ala_g14893 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.15 OrthoFinder output from all 47 species
Als_g08113 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.14 OrthoFinder output from all 47 species
Aob_g08786 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g16767 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01085 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g13957 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene36777.t1 CP24, LHCB6,... component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38727.t1 CP24, LHCB6,... component *(LHCb6) of LHC-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Azfi_s0186.g056695 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original... 0.07 OrthoFinder output from all 47 species
Cba_g06222 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g07812 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Ceric.08G051300.1 CP24, LHCB6,... component *(LHCb6) of LHC-II complex & original... 0.23 OrthoFinder output from all 47 species
Ceric.26G015400.1 CP24, LHCB6,... component *(LHCb6) of LHC-II complex & original... 0.12 OrthoFinder output from all 47 species
Dac_g26480 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g02505 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.18 OrthoFinder output from all 47 species
Dcu_g09088 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g30591 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.18 OrthoFinder output from all 47 species
Dde_g16061 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g17973 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.16 OrthoFinder output from all 47 species
Ehy_g05483 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01029789001 CP24, LHCB6 Photosynthesis.photophosphorylation.photosystem... 0.16 OrthoFinder output from all 47 species
Gb_27633 CP24, LHCB6 component LHCb6 of LHC-II complex 0.11 OrthoFinder output from all 47 species
LOC_Os04g38410.1 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.16 OrthoFinder output from all 47 species
Len_g14628 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Len_g18838 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Len_g37514 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Len_g37515 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Mp6g01650.1 CP24, LHCB6 component LHCb6 of LHC-II complex 0.25 OrthoFinder output from all 47 species
Msp_g01460 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g11766 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g03418 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g21203 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g10858 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g18148 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01878 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g05601 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g30781 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g14091 No alias component *(LHCb6) of LHC-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Smo271833 CP24, LHCB6 Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
Solyc01g105030.3.1 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.17 OrthoFinder output from all 47 species
Solyc01g105050.3.1 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.16 OrthoFinder output from all 47 species
Spa_g42268 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g42269 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Spa_g48848 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.13 OrthoFinder output from all 47 species
Spa_g54507 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Spa_g54890 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g05852 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g21610 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.16 OrthoFinder output from all 47 species
Zm00001e006561_P001 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.19 OrthoFinder output from all 47 species
Zm00001e041918_P001 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0030091 protein repair IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 75 251
No external refs found!