1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g049423

Adi_g049423


Description : component *(eL34) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000940_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g049423
Cluster HCCA: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00260490 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00260730 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT1G26880 No alias Ribosomal protein L34e superfamily protein 0.08 OrthoFinder output from all 47 species
AT1G69620 RPL34 ribosomal protein L34 0.04 OrthoFinder output from all 47 species
AT3G28900 No alias Ribosomal protein L34e superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g05903 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g19937 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aob_g12026 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g19797 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g25989 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0045.g029897 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Azfi_s0094.g043410 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0225.g058934 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.29G078700.1 Ceric.29G078700 component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000632.3 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Cre16.g661050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Dac_g02443 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g20175 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Dcu_g27575 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g28753 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g43816 RPL34 component *(eL34) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
GSVIVT01011419001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01019985001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os08g06040.1 LOC_Os08g06040 component RPL34 of LSU proteome component 0.06 OrthoFinder output from all 47 species
LOC_Os08g33920.1 LOC_Os08g33920 component RPL34 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os09g24690.1 LOC_Os09g24690 component RPL34 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Len_g06750 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Lfl_g26380 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_175574g0010 No alias component RPL34 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp4g17040.1 No alias component RPL34 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Msp_g09133 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c11_2940V3.1 RPL34, Pp3c11_2940 Ribosomal protein L34e superfamily protein 0.06 OrthoFinder output from all 47 species
Pp3c1_1800V3.1 RPL34, Pp3c1_1800 Ribosomal protein L34e superfamily protein 0.04 OrthoFinder output from all 47 species
Pp3c25_11980V3.1 Pp3c25_11980 Ribosomal protein L34e superfamily protein 0.04 OrthoFinder output from all 47 species
Pp3c2_34570V3.1 Pp3c2_34570 Ribosomal protein L34e superfamily protein 0.03 OrthoFinder output from all 47 species
Pp3c7_21380V3.1 Pp3c7_21380 Ribosomal protein L34e superfamily protein 0.03 OrthoFinder output from all 47 species
Sam_g05824 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g23757 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g23859 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g41835 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g44116 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo113433 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc05g007560.3.1 Solyc05g007560 component RPL34 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Solyc06g069860.4.1 Solyc06g069860 component RPL34 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Spa_g28558 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Spa_g37008 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g26519 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e004116_P001 Zm00001e004116 component RPL34 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Zm00001e021733_P002 Zm00001e021733 component RPL34 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e034114_P001 Zm00001e034114 component RPL34 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Zm00001e040229_P001 Zm00001e040229 component RPL34 of LSU proteome component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033176 proton-transporting V-type ATPase complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 24 119
No external refs found!