Ehy_g12588


Description : not classified & original description: none


Gene families : OG0002416 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002416_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g12588
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00254020 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g007692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007693 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g03628 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g12822 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g03874 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.19G035500.1 Ceric.19G035500 not classified & original description: pacid=50575844... 0.13 OrthoFinder output from all 47 species
Ceric.39G032200.1 Ceric.39G032200 not classified & original description: pacid=50583645... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000334.13 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g17051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_00884 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g38730.1 LOC_Os03g38730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g30883 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_10426793g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g43310 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g17551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g15634 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Solyc07g063430.3.1 Solyc07g063430 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g10000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004901_P001 Zm00001e004901 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e012491_P002 Zm00001e012491 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007248 Mpv17_PMP22 317 378
No external refs found!