Adi_g041241 (OLI7, RPL5B)

Aliases : OLI7, RPL5B

Description : component *(uL18) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0002471 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002471_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g041241

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00162800	OLI5, RPL5A,...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
AT3G25520	OLI5, RPL5A, PGY3, ATL5	ribosomal protein L5	0.07	OrthoFinder output from all 47 species
AT5G39740	OLI7, RPL5B	ribosomal protein L5 B	0.08	OrthoFinder output from all 47 species
Azfi_s0136.g050950	OLI7, RPL5B	not classified & original description: CDS=209-979	0.05	OrthoFinder output from all 47 species
Ceric.24G049300.1	OLI7, RPL5B,...	component *(uL18) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.24G050100.1	OLI7, RPL5B,...	component *(uL18) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000194.49	OLI7, RPL5B	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Cre14.g621450	OLI7, RPL5B	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dac_g27299	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dcu_g34942	OLI5, RPL5A, PGY3, ATL5	component *(uL18) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ehy_g08236	OLI5, RPL5A, PGY3, ATL5	component *(uL18) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01001906001	No alias	60S ribosomal protein L5 OS=Cucumis sativus	0.02	OrthoFinder output from all 47 species
Gb_16695	OLI7, RPL5B	component RPL5 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os01g67134.1	OLI5, RPL5A,...	component RPL5 of LSU proteome component	0.04	OrthoFinder output from all 47 species
MA_70965g0010	OLI7, RPL5B	component RPL5 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Mp4g15800.1	OLI7, RPL5B	component RPL5 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Msp_g02730	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Nbi_g20406	OLI5, RPL5A, PGY3, ATL5	component *(uL18) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Pir_g01232	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c7_25660V3.1	OLI7, RPL5B, Pp3c7_25660	ribosomal protein L5 B	0.03	OrthoFinder output from all 47 species
Ppi_g16089	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g10501	No alias	component *(uL18) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g20151	No alias	component *(uL18) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g29764	No alias	component *(uL18) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Smo144921	OLI5, RPL5A, PGY3, ATL5	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Solyc06g007670.4.1	OLI5, RPL5A,...	component RPL5 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Solyc06g082870.4.1	OLI5, RPL5A,...	component RPL5 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Solyc09g020130.3.1	OLI7, RPL5B,...	component RPL5 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Spa_g05892	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Spa_g15116	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Spa_g38167	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Spa_g43318	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Spa_g53510	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g01672	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Zm00001e000256_P001	OLI5, RPL5A,...	component RPL5 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e018972_P001	OLI5, RPL5A,...	component RPL5 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e028563_P004	OLI5, RPL5A,...	component RPL5 of LSU proteome component	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008097	5S rRNA binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	HCCA
MF	GO:0005048	signal sequence binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
MF	GO:0070001	aspartic-type peptidase activity	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005485	Rbsml_L5_euk/L18_arc	65	225
IPR025607	Rbsml_L5e_C	286	339

External Links

No external refs found!

Adi_g041241 (OLI7, RPL5B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation