Adi_g040734 (PAG1)

Aliases : PAG1

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none

Gene families : OG0004146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004146_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g040734

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00095p00127340	PAG1,...	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
Aob_g01189	PAG1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Aop_g01074	PAG1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Azfi_s0090.g042757	PAG1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Cre14.g619550	PAG1	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
LOC_Os01g59600.1	PAG1, LOC_Os01g59600	component alpha type-7 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Mp8g09510.1	PAG1	component alpha type-7 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Mpzg00480.1	PAG1	Proteasome subunit alpha type-3 OS=Spinacia oleracea...	0.01	OrthoFinder output from all 47 species
Msp_g01437	PAG1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Pir_g48752	PAG1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Solyc10g077030.2.1	PAG1, Solyc10g077030	component alpha type-7 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Solyc10g081130.2.1	PAG1, Solyc10g081130	component alpha type-7 of 26S proteasome	0.04	OrthoFinder output from all 47 species
Tin_g00620	PAG1	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Zm00001e028888_P001	PAG1, Zm00001e028888	component alpha type-7 of 26S proteasome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEA	Interproscan
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	31	216
IPR000426	Proteasome_asu_N	8	30

External Links

No external refs found!

Adi_g040734 (PAG1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation