1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g026236

Adi_g026236 (HCHIB, B-CHI,...)


Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B

Description : not classified & original description: none


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g026236
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00199930 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00079p00183380 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g18400.1 LOC_Os01g18400 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os04g41640.1 LOC_Os04g41640 Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os05g04690.1 LOC_Os05g04690 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os05g33140.1 HCHIB, B-CHI,... Chitinase 9 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_10425967g0010 HCHIB, B-CHI,... Basic endochitinase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_134123g0010 No alias Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 106.0) 0.06 OrthoFinder output from all 47 species
MA_191308g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_8921185g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.02 OrthoFinder output from all 47 species
Mp2g24410.1 HCHIB, B-CHI,... Endochitinase CH25 OS=Brassica napus... 0.02 OrthoFinder output from all 47 species
Mp4g20470.1 HCHIB, B-CHI,... Basic endochitinase B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pp3c1_30410V3.1 Pp3c1_30410 chitinase, putative 0.04 OrthoFinder output from all 47 species
Pp3c6_130V3.1 HCHIB, B-CHI,... basic chitinase 0.02 OrthoFinder output from all 47 species
Solyc02g082960.3.1 HCHIB, B-CHI,... Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Zm00001e007715_P001 ATEP3, EP3,... Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 330.0) 0.03 OrthoFinder output from all 47 species
Zm00001e007716_P001 Zm00001e007716 Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 455.0) 0.01 OrthoFinder output from all 47 species
Zm00001e027534_P001 Zm00001e027534 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Zm00001e041138_P001 ATEP3, EP3,... Endochitinase B (Fragment) OS=Zea mays... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 77 282
IPR001002 Chitin-bd_1 28 66
No external refs found!