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  5. Adi_g023440

Adi_g023440 (SMU2)


Aliases : SMU2

Description : component *(SMU2) of SMU splicing factor complex & original description: none


Gene families : OG0004764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g023440

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00259060 SMU2,... Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species
Als_g27563 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.02 OrthoFinder output from all 47 species
Dac_g16482 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g01347 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.05 OrthoFinder output from all 47 species
GSVIVT01015011001 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.04 OrthoFinder output from all 47 species
Gb_03628 SMU2 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_08082 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species
Lfl_g32040 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
MA_713g0010 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.06 OrthoFinder output from all 47 species
Mp5g17010.1 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.03 OrthoFinder output from all 47 species
Ore_g30538 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
Smo122486 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR012492 RED_C 473 579
IPR012916 RED_N 28 245
No external refs found!