Description : SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex & original description: none
Gene families : OG0001292 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001292_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ehy_g09954 | |
Cluster | HCCA: Cluster_54 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G55040 | No alias | DNA-binding bromodomain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
Als_g08054 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g08781 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.15G032800.1 | Ceric.15G032800 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.20G005700.1 | Ceric.20G005700 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g24243 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
Gb_27356 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Pir_g60712 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g11339 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g051210.3.1 | Solyc06g051210 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g064700.4.1 | Solyc07g064700 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Tin_g10292 | No alias | SMARCI component *(BRD) of SWI/SNF chromaTin remodeling... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001487 | Bromodomain | 212 | 293 |
No external refs found! |