Heatmap: Cluster_54 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Internodes of Aerial Stem	Leaf Sheath at Stem Node	Root
Ehy_g00699 (VIP3)	-0.64	-0.12	0.52
Ehy_g00801 (RBL13)	-0.22	-0.15	0.31
Ehy_g00920 (HISN7)	-0.08	-0.17	0.21
Ehy_g01050	-0.24	-0.08	0.27
Ehy_g01088	-0.29	-0.1	0.32
Ehy_g01200	-0.12	-0.07	0.17
Ehy_g01323	-0.36	-0.09	0.35
Ehy_g01409	-0.24	-0.21	0.37
Ehy_g01622 (ARABIDILLO1)	-0.14	-0.03	0.16
Ehy_g01654	-0.27	-0.24	0.41
Ehy_g01667	-0.08	-0.24	0.27
Ehy_g01701	-0.47	-0.35	0.58
Ehy_g01702 (LDL3)	-0.25	-0.07	0.27
Ehy_g01710 (THO2)	-0.38	-0.13	0.4
Ehy_g01920	-0.42	-0.35	0.55
Ehy_g02271 (NRPB3)	-0.44	-0.1	0.41
Ehy_g02555	-0.24	-0.11	0.3
Ehy_g02843	-0.26	-0.14	0.33
Ehy_g02942	-0.31	-0.13	0.35
Ehy_g02962	-0.29	-0.21	0.4
Ehy_g03101	-1.21	-0.31	0.82
Ehy_g03280	-0.28	-0.43	0.52
Ehy_g03502	-0.5	-0.02	0.39
Ehy_g03730	-0.38	-0.2	0.44
Ehy_g03755	-0.33	-0.01	0.28
Ehy_g03756	-0.47	-0.07	0.41
Ehy_g03836	-0.46	-0.13	0.44
Ehy_g03845	-0.33	-0.15	0.38
Ehy_g04036	-0.4	-0.32	0.53
Ehy_g04045 (EMB1691)	-0.27	-0.24	0.4
Ehy_g04240	-0.32	-0.22	0.42
Ehy_g04506	-0.23	-0.36	0.45
Ehy_g04547	-0.17	-0.4	0.44
Ehy_g04756	-0.17	-0.25	0.34
Ehy_g04806	-0.48	-0.28	0.55
Ehy_g04910	-0.23	-0.32	0.43
Ehy_g04960 (PUM24)	-0.16	-0.11	0.24
Ehy_g05672	-0.09	-0.32	0.33
Ehy_g05717 (MBD10)	-0.33	-0.13	0.37
Ehy_g05819	-0.45	-0.13	0.43
Ehy_g05880 (J2)	-0.29	-0.13	0.35
Ehy_g05981	-0.13	-0.25	0.32
Ehy_g06040 (EMB2219)	-0.55	-0.33	0.6
Ehy_g06078	-0.4	-0.26	0.49
Ehy_g06220	-0.33	-0.0	0.27
Ehy_g06333	-0.09	-0.39	0.37
Ehy_g06353	-0.16	-0.25	0.34
Ehy_g06648 (CXIP4)	-0.16	-0.18	0.29
Ehy_g06721	-0.36	-0.19	0.42
Ehy_g06961 (PRMT4B)	-0.38	-0.04	0.33
Ehy_g06979 (UPF3)	-0.2	-0.08	0.24
Ehy_g06989	-0.38	-0.07	0.35
Ehy_g07051 (IDD2)	-0.09	-0.36	0.36
Ehy_g07127 (CLI1)	-0.53	-0.34	0.6
Ehy_g07144 (PCFS4)	-0.21	-0.2	0.34
Ehy_g07411	-0.24	0.01	0.2
Ehy_g07494 (MBD11)	-0.2	-0.07	0.23
Ehy_g07703	-0.24	-0.6	0.58
Ehy_g07817	-0.6	-0.14	0.52
Ehy_g07820	-0.09	-0.21	0.26
Ehy_g07840	-0.29	-0.25	0.42
Ehy_g07931 (G2484-1)	-0.26	-0.18	0.36
Ehy_g07962	-0.13	-0.15	0.24
Ehy_g08403 (XBAT35)	-0.49	-0.09	0.43
Ehy_g08624	-0.68	-0.21	0.59
Ehy_g08700	-0.43	-0.2	0.48
Ehy_g09012	-0.51	-0.04	0.4
Ehy_g09055 (AHL1)	-0.32	-0.31	0.48
Ehy_g09133	-0.68	-0.25	0.62
Ehy_g09232 (MYB3R-5)	-0.11	-0.36	0.37
Ehy_g09266	-0.36	-0.17	0.42
Ehy_g09269	-0.23	-0.27	0.39
Ehy_g09272	-0.31	-0.24	0.43
Ehy_g09831	-0.09	-0.19	0.25
Ehy_g09858	-0.16	-0.22	0.32
Ehy_g09930 (FRL2)	-0.81	-0.22	0.65
Ehy_g09954	-0.18	-0.29	0.38
Ehy_g09968	-0.41	-0.16	0.43
Ehy_g09982 (CHB4)	-0.2	-0.1	0.26
Ehy_g10552	-0.41	-0.19	0.46
Ehy_g10807 (CYCT1;4)	-0.27	-0.06	0.27
Ehy_g10894	-0.1	-0.22	0.27
Ehy_g10949 (EIF4B2)	-0.43	-0.01	0.33
Ehy_g11074	-0.54	-0.15	0.5
Ehy_g11485	-0.29	-0.44	0.53
Ehy_g11743	-0.38	-0.57	0.64
Ehy_g11919	-0.35	-0.04	0.31
Ehy_g12152	-0.98	0.03	0.56
Ehy_g12527	-0.92	-0.1	0.62
Ehy_g12876 (emb1507)	-0.41	-0.22	0.47
Ehy_g13170	-0.62	-0.06	0.48
Ehy_g13188 (SHM7)	-0.2	-0.26	0.37
Ehy_g13255	-0.13	-0.13	0.23
Ehy_g13535	-0.39	-0.15	0.42
Ehy_g13541 (PP2-B11)	-0.56	-0.0	0.41
Ehy_g13721	-0.41	-0.18	0.45
Ehy_g13836 (LD)	-0.24	-0.08	0.27
Ehy_g13975	-0.29	-0.12	0.34
Ehy_g14031	-1.06	-0.06	0.64
Ehy_g14047	-0.31	-0.45	0.55
Ehy_g14200 (SUVH1)	-0.4	-0.11	0.4
Ehy_g14367	-0.21	-0.22	0.35
Ehy_g14415	-0.18	-0.14	0.27
Ehy_g14465	-1.71	-0.69	1.05
Ehy_g14468	-0.2	-0.3	0.4
Ehy_g14660	-0.63	-0.05	0.47
Ehy_g16200	-0.9	-0.28	0.72
Ehy_g16246 (WTF1)	-0.26	-0.31	0.44
Ehy_g16252	-0.77	-0.29	0.68
Ehy_g16259 (SPX2)	-0.72	-0.26	0.64
Ehy_g16622	-0.34	-0.46	0.56
Ehy_g16930 (MYB73)	-0.99	-1.49	1.1
Ehy_g17116 (STA1)	-0.13	-0.25	0.32
Ehy_g17712	-0.41	-0.2	0.46
Ehy_g17939	-0.21	-0.11	0.27
Ehy_g18009	-0.17	-0.13	0.26
Ehy_g18097 (OBE2)	-0.4	-0.19	0.45
Ehy_g18103	-0.18	-0.23	0.34
Ehy_g18234 (MPPBETA)	-0.84	-0.17	0.64
Ehy_g18586	-0.38	-0.09	0.37
Ehy_g18632 (ASE1)	-1.03	-0.07	0.64
Ehy_g18699 (TAF8)	-0.67	-0.25	0.62
Ehy_g18729	-0.93	-0.23	0.7
Ehy_g18831 (GTA2)	-0.26	-0.06	0.27
Ehy_g19292 (FCA)	-0.55	-0.29	0.59
Ehy_g19553	-0.44	-0.16	0.45
Ehy_g19575	-0.42	-0.21	0.47
Ehy_g19755 (FZR2)	-0.16	-0.25	0.34
Ehy_g19973	-0.14	-0.18	0.27
Ehy_g20389 (VCR)	-0.29	-0.07	0.3
Ehy_g20457	-1.5	-0.25	0.85
Ehy_g20483	-0.86	-0.33	0.72
Ehy_g20806	-0.2	-0.27	0.38
Ehy_g20808 (HD1)	-0.35	-0.09	0.35
Ehy_g20814 (CLO)	-0.27	-0.11	0.32
Ehy_g21019	-0.99	-0.81	0.94
Ehy_g21460 (NFB1)	-0.43	-0.03	0.36
Ehy_g21785	-0.28	-0.16	0.36
Ehy_g22345	-0.63	-0.51	0.72
Ehy_g22515	-0.17	-0.08	0.22
Ehy_g22558	-0.57	-0.18	0.53
Ehy_g23011	-0.68	-1.73	1.05
Ehy_g23014	-0.45	-0.0	0.34
Ehy_g23151	-0.29	-0.25	0.43
Ehy_g23518	-0.22	-0.37	0.45
Ehy_g23711	-0.09	-0.35	0.35
Ehy_g23714	-0.23	-0.12	0.3
Ehy_g24000	-0.36	-0.14	0.39
Ehy_g24073 (TLP3)	-0.23	-0.33	0.44
Ehy_g24242	-0.22	-0.04	0.23
Ehy_g24299	-1.22	-0.36	0.84
Ehy_g25126	-0.2	-0.38	0.44
Ehy_g25959	-0.51	-0.5	0.67
Ehy_g26244	-0.39	-0.25	0.48
Ehy_g26251	-0.48	-0.34	0.58
Ehy_g26342	-0.51	-0.76	0.77
Ehy_g26379 (MKP2)	-0.47	-0.64	0.71
Ehy_g26387 (BPC3)	-0.24	-0.36	0.46
Ehy_g26425	-0.54	-1.06	0.87
Ehy_g26442	-0.85	-2.64	1.19
Ehy_g27191	-0.55	-0.81	0.81
Ehy_g27368	-0.21	-0.18	0.32
Ehy_g27443 (ATSRL1)	-0.62	-0.26	0.59
Ehy_g28042	-0.23	-0.17	0.33
Ehy_g28526	-0.3	-0.22	0.41
Ehy_g28906	-0.33	-0.28	0.47
Ehy_g30151 (TAF4)	-0.65	-0.3	0.63

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.