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  5. Adi_g021932

Adi_g021932 (AMY3, ATAMY3)


Aliases : AMY3, ATAMY3

Description : alpha amylase & original description: none


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g021932
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00183740 AMY2, ATAMY2,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Als_g15129 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14308 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15848 AMY2, ATAMY2 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008714001 AMY2, ATAMY2 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
GSVIVT01031740001 AMY1, ATAMY1 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
GSVIVT01031742001 AMY1, ATAMY1 Alpha-amylase OS=Vigna mungo 0.02 OrthoFinder output from all 47 species
Gb_04800 AMY2, ATAMY2 alpha amylase 0.02 OrthoFinder output from all 47 species
Gb_04803 AMY2, ATAMY2 alpha amylase 0.02 OrthoFinder output from all 47 species
Gb_30448 AMY1, ATAMY1 alpha amylase 0.02 OrthoFinder output from all 47 species
LOC_Os04g33040.1 AMY2, ATAMY2,... alpha amylase 0.01 OrthoFinder output from all 47 species
LOC_Os06g49970.2 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
LOC_Os09g28400.1 AMY1, ATAMY1,... alpha amylase 0.02 OrthoFinder output from all 47 species
Len_g01238 AMY2, ATAMY2 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24732 AMY1, ATAMY1 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426497g0020 AMY2, ATAMY2 Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_217935g0010 AMY1, ATAMY1 alpha amylase 0.06 OrthoFinder output from all 47 species
MA_336273g0010 AMY1, ATAMY1 alpha amylase 0.01 OrthoFinder output from all 47 species
MA_9120657g0010 AMY2, ATAMY2 Probable alpha-amylase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g30066 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37571 AMY2, ATAMY2 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02338 AMY2, ATAMY2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24472 No alias alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Smo97625 AMY1, ATAMY1 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Solyc04g078930.4.1 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
Zm00001e003799_P001 AMY1, ATAMY1,... alpha amylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 920 982
IPR006047 Glyco_hydro_13_cat_dom 617 899
No external refs found!