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  5. Adi_g021931

Adi_g021931


Description : SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex & original description: none


Gene families : OG0004276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g021931

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00114590 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aob_g11408 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Ceric.02G090500.1 Ceric.02G090500 SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Dac_g09473 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dcu_g23595 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ehy_g19588 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
LOC_Os12g34330.1 LOC_Os12g34330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g20530 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Lfl_g17382 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
MA_76768g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g17646 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Solyc01g087340.3.1 Solyc01g087340 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc01g087410.4.1 Solyc01g087410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g087430.3.1 Solyc01g087430 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g08098 No alias SMARCI component *(BRD) of SWI/SNF chromaTin remodeling... 0.02 OrthoFinder output from all 47 species
Zm00001e018296_P003 Zm00001e018296 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!