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  5. Ehy_g09930

Ehy_g09930 (FRL2)


Aliases : FRL2

Description : not classified & original description: none


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g09930
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00134410 evm_27.TU.AmTr_v1... FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g020466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G013900.1 Ceric.37G013900 not classified & original description: pacid=50615693... 0.02 OrthoFinder output from all 47 species
Dac_g28141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_33604 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g07380.1 LOC_Os09g07380 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g00652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g02882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430352g0010 No alias FRIGIDA-like protein 4b OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10436820g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_105292g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g06900.1 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g02468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026441 No alias not classified & original description: CDS=224-2032 0.02 OrthoFinder output from all 47 species
Sam_g24376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g007640.3.1 Solyc06g007640 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g09351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12674 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 231 519
No external refs found!