Ehy_g09920 (WRKY4)

Aliases : WRKY4

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g09920
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00145410	ATWRKY50,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.02	OrthoFinder output from all 47 species
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.02	OrthoFinder output from all 47 species
Aspi01Gene15984.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g26774	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g42568	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G038600.1	WRKY33,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g24199	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g03251	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01012196001	ATWRKY57, WRKY57	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
GSVIVT01018300001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01022259001	ATWRKY13, WRKY13	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
Gb_02625	WRKY75, ATWRKY75	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os03g21710.1	ATWRKY70,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g09020.1	ATWRKY50,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g45230.1	WRKY43,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os09g25060.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os09g25070.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Len_g16970	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g54326	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10432362g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_6790522g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_7068293g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Nbi_g01131	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g28115	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019809	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-1077	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0216.g026051	WRKY42, AtWRKY42	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Solyc03g095770.3.1	ATWRKY70,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc04g051690.4.1	ATWRKY51,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc09g010960.3.1	WRKY49,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Tin_g03844	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e015980_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027460_P001	WRKY56,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e036514_P001	WRKY72,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0010274	hydrotropism	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	294	350
IPR003657	WRKY_dom	477	533

External Links

No external refs found!

Ehy_g09920 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation