Description : not classified & original description: none
Gene families : OG0002215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ehy_g09638 | |
Cluster | HCCA: Cluster_71 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g38034 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0109.g045403 | No alias | not classified & original description: CDS=480-1325 | 0.02 | OrthoFinder output from all 47 species | |
Ceric.04G007000.1 | Ceric.04G007000 | not classified & original description: pacid=50632420... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000248.71 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Dac_g34475 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g02649 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g23311 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g13630 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001510 | RNA methylation | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005886 | plasma membrane | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009306 | protein secretion | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | HCCA |
MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | HCCA |
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
BP | GO:0030488 | tRNA methylation | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
CC | GO:0034708 | methyltransferase complex | IEP | HCCA |
BP | GO:0035592 | establishment of protein localization to extracellular region | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0071692 | protein localization to extracellular region | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
MF | GO:2001070 | starch binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002816 | TraB/PrgY/GumN_fam | 75 | 292 |
No external refs found! |