Adi_g016368


Description : not classified & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g016368

Target Alias Description ECC score Gene Family Method Actions
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
Adi_g016974 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39238 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046029 No alias LRR-domain extensin & original description: CDS=1-1872 0.03 OrthoFinder output from all 47 species
Cba_g14018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g55943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015276001 No alias Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
LOC_Os01g08470.1 LOC_Os01g08470 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
LOC_Os07g07990.1 LOC_Os07g07990 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Len_g38364 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05430 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05847 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018499 No alias LRR-domain extensin & original description: CDS=1-1542 0.04 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Spa_g01730 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05733 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g09054 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013618_P001 LRX1, Zm00001e013618 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e031217_P001 Zm00001e031217 Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 87 119
No external refs found!