Solyc10g084780.2.1 (Solyc10g084780.2)


Aliases : Solyc10g084780.2

Description : 10.7 cell wall.modification member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. EXP3


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g084780.2.1
Cluster HCCA cluster: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.02 Gene family
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 Gene family
AT1G62980 EXPA18, EXP18,... expansin A18 0.02 Gene family
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.02 Gene family
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.05 Gene family
AT2G40610 EXPA8, ATHEXP... expansin A8 0.05 Gene family
AT3G15370 ATHEXP ALPHA... expansin 12 0.05 Gene family
AT3G29030 EXP5, ATHEXP... expansin A5 0.04 Gene family
AT4G01630 ATHEXP ALPHA... expansin A17 0.05 Gene family
AT5G02260 EXP9, EXPA9,... expansin A9 0.05 Gene family
AT5G05290 EXPA2, ATHEXP... expansin A2 0.03 Gene family
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.13 Gene family
GSVIVT01008762001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
GSVIVT01011437001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.05 Gene family
GSVIVT01019965001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
GSVIVT01028215001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01029411001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
GSVIVT01033691001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os01g16770 Os01g0274500 10.7 cell wall.modification Encodes an expansin. Naming... 0.05 Gene family
LOC_Os02g16780 Os02g0267700 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os02g16850 Os02g0268600 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os02g51040 Os02g0744200 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os03g06000 Os03g0155300 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os03g06010 Os03g0155500 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g06020 Os03g0155700 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os03g06040 Os03g0155900 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os04g15840 Os04g0228400 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os05g19600 Os05g0277000 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os08g44790 Os08g0561900 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os10g30340 Os10g0439200 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_10425823g0010 No alias 10.7 cell wall.modification putative expansin. Naming... 0.03 Gene family
MA_134413g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
MA_40314g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_61945g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
MA_915221g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Smo75237 PACid_15411282 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Smo90935 PACid_15416360 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
Solyc08g080060.3.1 Solyc08g080060.3 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d016022 GRMZM2G146540 10.7 cell wall.modification member of Alpha-Expansin... 0.08 Gene family
Zm00001d016054 GRMZM2G359799 10.7 cell wall.modification Member of Alpha-Expansin... 0.08 Gene family
Zm00001d027717 GRMZM2G173826 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032876 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
Zm00001d032881 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032882 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032884 GRMZM2G035189 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032886 GRMZM2G414779 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d034663 GRMZM2G368886 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d038476 GRMZM2G361064 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d040379 GRMZM2G149605 10.7 cell wall.modification member of Alpha-Expansin... 0.09 Gene family
Zm00001d048418 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 164 241
IPR009009 RlpA-like_DPBB 68 153
No external refs found!