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  5. Adi_g013959

Adi_g013959 (HCF106)


Aliases : HCF106

Description : component *(cpTatB) of thylakoid membrane Tat translocation system & original description: none


Gene families : OG0005619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g013959
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00224110 HCF106,... Protein translocation.chloroplast.thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Aev_g42933 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.02 OrthoFinder output from all 47 species
Ala_g07834 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.02 OrthoFinder output from all 47 species
Aob_g02696 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Ceric.39G008300.1 HCF106, Ceric.39G008300 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Cre08.g371650 HCF106 Protein translocation.chloroplast.thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Dcu_g00674 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
GSVIVT01028894001 HCF106 Protein translocation.chloroplast.thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
LOC_Os11g37130.1 HCF106, LOC_Os11g37130 HCF106 protein involved in PS-II assembly. component... 0.02 OrthoFinder output from all 47 species
Len_g14600 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Lfl_g30372 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
MA_919815g0010 HCF106 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp8g12830.1 HCF106 HCF106 protein involved in PS-II assembly. component... 0.02 OrthoFinder output from all 47 species
Nbi_g13630 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Ore_g13537 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Pir_g11584 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.02 OrthoFinder output from all 47 species
Pnu_g25885 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004868 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.05 OrthoFinder output from all 47 species
Sam_g08783 No alias component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Solyc03g025310.3.1 HCF106, Solyc03g025310 HCF106 protein involved in PS-II assembly. component... 0.03 OrthoFinder output from all 47 species
Spa_g11354 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Zm00001e008326_P002 HCF106, Zm00001e008326 HCF106 protein involved in PS-II assembly. component... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003369 TatA/B/E 81 127
No external refs found!