Description : not classified & original description: none
Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00113p00116350 | evm_27.TU.AmTr_v1... | Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AT1G22330 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G54770 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
Ala_g19204 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene51493.t1 | Aspi01Gene51493 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0009.g011816 | No alias | not classified & original description: CDS=390-1343 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0019.g015267 | No alias | not classified & original description: CDS=1-609 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13416 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dac_g11098 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g33564 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g06381 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Gb_00857 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Gb_30439 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Gb_39269 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g26828 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_1682g0010 | No alias | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g03322 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g54869 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e001294_P001 | Zm00001e001294 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023856_P001 | Zm00001e023856 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006284 | base-excision repair | IEP | HCCA |
BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
CC | GO:0070449 | elongin complex | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 87 | 142 |
No external refs found! |