Ehy_g08965


Description : not classified & original description: none


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g08965

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00113p00116350 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G22330 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
AT3G54770 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
Ala_g19204 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene51493.t1 Aspi01Gene51493 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g011816 No alias not classified & original description: CDS=390-1343 0.02 OrthoFinder output from all 47 species
Azfi_s0019.g015267 No alias not classified & original description: CDS=1-609 0.03 OrthoFinder output from all 47 species
Cba_g13416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g11098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_00857 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_30439 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_39269 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g26828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_1682g0010 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Pir_g03322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001294_P001 Zm00001e001294 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e023856_P001 Zm00001e023856 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0070449 elongin complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 87 142
No external refs found!