Adi_g011982


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g011982

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00172750 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00700p00004930 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.1 OrthoFinder output from all 47 species
Adi_g058400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05070 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42702.t1 Aspi01Gene42702 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55584.t1 Aspi01Gene55584 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55586.t1 Aspi01Gene55586 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55587.t1 Aspi01Gene55587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55589.t1 Aspi01Gene55589 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.09G071300.1 Ceric.09G071300 not classified & original description: pacid=50588528... 0.06 OrthoFinder output from all 47 species
Ceric.09G071400.1 Ceric.09G071400 not classified & original description: pacid=50587640... 0.04 OrthoFinder output from all 47 species
Ceric.21G079300.1 Ceric.21G079300 not classified & original description: pacid=50602615... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001343.3 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g26863 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g19066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013268001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01013270001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_15429 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_35998 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g27130.1 LOC_Os02g27130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10426328g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_10437247g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_295252g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_342412g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_58863g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_74056g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_901094g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g38228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25798 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g17487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo444980 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc09g009350.2.1 Solyc09g009350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g09459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17786 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009291 Vps62 2242 2383
IPR009291 Vps62 2019 2166
IPR010482 Peroxin 2901 3019
IPR031642 VPS13_mid_RBG 585 818
IPR009543 VPS13_VAB 3275 3584
IPR026854 VPS13-like_N 2 115
IPR031646 VPS13_extend_chorein 141 385
No external refs found!