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  5. Adi_g011978

Adi_g011978


Description : not classified & original description: none


Gene families : OG0002205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g011978

Target Alias Description ECC score Gene Family Method Actions
Adi_g083896 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g13607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07371 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g08351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49845.t1 Aspi01Gene49845 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g59047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G056900.1 Ceric.33G056900 not classified & original description: pacid=50606463... 0.08 OrthoFinder output from all 47 species
Dcu_g04155 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01034750001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01035731001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_25776 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g08430.1 LOC_Os01g08430 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10428588g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_37588g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g09190.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g24516 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g02509 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g25804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo444069 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g053190.4.1 Solyc07g053190 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc08g067920.3.1 Solyc08g067920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g15474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13150 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e025916_P001 Zm00001e025916 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019542 Enhancer_polycomb-like_N 1299 1392
No external refs found!