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  5. Adi_g011502

Adi_g011502


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g011502

Target Alias Description ECC score Gene Family Method Actions
AT2G03110 No alias RNA binding;nucleic acid binding 0.02 OrthoFinder output from all 47 species
AT5G46190 No alias RNA-binding KH domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g021764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02047 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09611 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Als_g19267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06699 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Cba_g07160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07339 HEN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12254 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Cba_g17642 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g24288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G007100.1 Ceric.14G007100 not classified & original description: pacid=50632910... 0.02 OrthoFinder output from all 47 species
Dac_g02274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16071 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Dcu_g03944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09234 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ehy_g18057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03080 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13999 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008079 No alias not classified & original description: CDS=527-2194 0.03 OrthoFinder output from all 47 species
Spa_g08106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17412 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36753 PEP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001825_P001 Zm00001e001825 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e012623_P002 Zm00001e012623 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP HCCA
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 344 376
IPR004088 KH_dom_type_1 40 89
No external refs found!