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  5. Ehy_g08699

Ehy_g08699


Description : PHD finger transcription factor & original description: none


Gene families : OG0003668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g08699
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT5G12400 No alias DNA binding;zinc ion binding;DNA binding 0.03 OrthoFinder output from all 47 species
AT5G22760 No alias PHD finger family protein 0.02 OrthoFinder output from all 47 species
AT5G35210 No alias metalloendopeptidases;zinc ion binding;DNA binding 0.04 OrthoFinder output from all 47 species
Adi_g023154 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07161 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75389 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G051900.1 Ceric.29G051900 PHD finger transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g04154 No alias PHD finger transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01031411001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.04 OrthoFinder output from all 47 species
LOC_Os11g05130.1 LOC_Os11g05130 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_10689g0010 No alias PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Mp4g03480.1 No alias PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g38137 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51883 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003692 No alias PHD finger transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Smo441144 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
Solyc11g065160.3.1 Solyc11g065160 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018501 DDT_dom 517 571
IPR019787 Znf_PHD-finger 707 750
No external refs found!