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  5. Adi_g008297

Adi_g008297 (AL7)


Aliases : AL7

Description : methylation reader Alfin of PRC1 complex & original description: none


Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g008297

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00155940 AL5,... RNA biosynthesis.transcriptional activation.Alfin-like... 0.03 OrthoFinder output from all 47 species
AT1G14510 AL7 alfin-like 7 0.03 OrthoFinder output from all 47 species
Adi_g011436 AL7 methylation reader Alfin of PRC1 complex & original... 0.07 OrthoFinder output from all 47 species
Als_g04779 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Als_g50642 AL1 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Aop_g08659 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Aop_g49023 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene02860.t2 AL2, Aspi01Gene02860 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09474.t1 AL1, Aspi01Gene09474 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene55219.t1 AL2, Aspi01Gene55219 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene62570.t1 AL2, Aspi01Gene62570 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043317 AL1 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0301.g063715 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g23274 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g33236 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g33237 AL1 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Cba_g70690 AL1 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Dac_g03128 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Dde_g00322 AL1 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Gb_11603 AL5 Alfin-like transcription factor 0.04 OrthoFinder output from all 47 species
Len_g03607 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Lfl_g11879 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Lfl_g25000 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Mp2g06640.1 AL1 Alfin-like transcription factor 0.01 OrthoFinder output from all 47 species
Nbi_g17048 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g03364 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g12876 AL1 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g13361 AL1 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Pnu_g06791 AL5 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g63688 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006834 AL4 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g11100 No alias methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Solyc09g005360.3.1 AL1, Solyc09g005360 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species
Tin_g00544 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e035527_P001 AL5, Zm00001e035527 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021998 Alfin_N 12 137
IPR019787 Znf_PHD-finger 195 243
No external refs found!