Solyc10g055820.2.1 (Solyc10g055820.2)


Aliases : Solyc10g055820.2

Description : 20.1 stress.biotic encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase (HCHIB)


Gene families : OG_01_0001170 (Gene family) Phylogenetic Tree(s): OG0001170_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g055820.2.1
Cluster HCCA cluster: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007190001 No alias 20.1 stress.biotic encodes a basic chitinase involved in... 0.07 Gene family
LOC_Os03g30470 Os03g0418000 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family
LOC_Os10g39680 Os10g0542900 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family
MA_10313114g0010 No alias 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family
Zm00001d009936 GRMZM2G062974 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan
BP GO:0006032 chitin catabolic process IEA InterProScan
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 32 70
IPR000726 Glyco_hydro_19_cat 83 315
No external refs found!