Adi_g001969 (ABF1)

Aliases : ABF1

Description : bZIP class-A transcription factor & original description: none

Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g001969

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00152p00081700	FD-1, FD,...	RNA biosynthesis.transcriptional activation.bZIP...	0.02	OrthoFinder output from all 47 species
AT1G45249	ABF2, ATAREB1, AREB1	abscisic acid responsive elements-binding factor 2	0.02	OrthoFinder output from all 47 species
AT3G19290	AREB2, ABF4	ABRE binding factor 4	0.04	OrthoFinder output from all 47 species
AT5G44080	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.02	OrthoFinder output from all 47 species
Adi_g059960	DPBF3, AREB3	bZIP class-A transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g37875	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g04792	DPBF3, AREB3	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01029696001	GBF4	RNA biosynthesis.transcriptional activation.bZIP...	0.02	OrthoFinder output from all 47 species
LOC_Os01g64730.1	GBF4, LOC_Os01g64730	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
LOC_Os05g36160.1	GBF4, LOC_Os05g36160	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
LOC_Os08g43600.1	FD-1, FD,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Len_g03850	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Len_g18511	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g08399	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g108080.4.1	AREB2, ABF4,...	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Zm00001e015956_P002	ABF2, ATAREB1,...	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Zm00001e019163_P004	GBF4, Zm00001e019163	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Zm00001e022136_P001	ABF2, ATAREB1,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0030490	maturation of SSU-rRNA	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
CC	GO:0030686	90S preribosome	IEP	HCCA
CC	GO:0030688	preribosome, small subunit precursor	IEP	HCCA
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	309	352

External Links

No external refs found!

Adi_g001969 (ABF1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation